Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922590.1_cds_XP_016471354.1_63705
CDS Infomation

[gene=LOC107793497] [db_xref=GeneID:107793497] [protein=AT-rich interactive domain-containing protein 1-like] [protein_id=XP_016471354.1] [location=complement(join(63306..64133,69397..69966))] [gbkey=CDS]
Sequence

ATGGAACTTGAGCTGGATTTGAGGGAGATTTTAATGAAAATTTCAGATGAAAAGAACAAA
AATGAGGGAGGATATGCAAATGTTGACTTGGCTAAGAGTGAGTTTGATACTGTCAAACAG
CTTTGCAATGATATCGAAGCTGATGATTTTGTTTTCATCAATAAACACTCTAAGAAATTT
GATGGAAATATAAGTCCGGACCTTAATGAATGTATACTAGAGGATGTTGATGAAAAGAGC
AGTGTCGGTCATGATGATAAATGTTCGAAATTTGTCAGTGGAAGACGAAGTGATGATTGT
GGCACAGATGAAATTAGGCAAATGAATTCAAGTGTGGTGATGGAAGATGAGAACAATAGG
AAGAGGAAACGAGAGTCTTACACGGACTTGCTGAGGTGGGTTACTAACGTCGCGAAAGAT
CCTTGTGATCCTGCCATTGGGTCTTTGCCAGAAAGGTCTAAGTGGAAGTTTTACGGGAAT
GATGTAATTTGGAAGCAGGTTCTGCTGCTGCGAGATGAAATGCTTTTGAGAAGAAATGCA
GATACGAGTGCTCAGTGCTCGATATGGCAGATTAAACAGAAGATGCATCCATCTATGTAT
GACGAGGATGCTGCTGCTGAGAGAGTAAGATGTAGCCAGCGGGTTCTAGTTGCTAAAAAT
CCATTGAAGAAGGCTCTCTTTTCAGCATCATCATCCTCAAGTTATCCAAGTGATGAGGAT
CCGATTGATGGACCTGCTGATTCTTCTGCAGAGTCAGAAGTTGGTCTTTATTGGAAACAG
CGTCGAAAGAGAATACCAGTTGGACCACAGTTTCAAGCAGATATTCCTGAATGGAGGCAG
GAGAAGTGTGAAAGTGACTCCAAATGGTTGCGCACCCAAATCTGGCCGCTAGACAAACAA
GAAAAAAACAGAATGTTGATTGAAAGAGATCCTATTGGAAGAGGAAGAGAAGATATATGC
GGCTGCCAATACCCAGGTTCTTATGAATGCATCAAGTTTCATCTTGCTGAGAAACGGAGA
AAGGTTAAACTTGAGTTGGGATCAGCCTTTTATCGTTGGAAATTTGACTTGATGGGCGAA
GAAGTTGCACTTTCTTGGACAAAAGAAGAAGAAAAGAAATTCCAGGATATAGTGAAATTG
AACCCTTTGTCGACAAACAAGAGTTTTTGGAATGAAATATTCAAGATCTTTCCTAACAAA
AGTAGGGAATCTTTGGTCAGCTACCACTTTAACGTCTTTCTTTTACGGCGCAGAGGTCAC
CAGAATCGGACAAATGCAAGTATTATCGACAGTGATGATGATGAACCAGAGTACGGACCT
CGAACTAATTGTTTTGGGAGGGATTCAAAATTCTCCATCTTTTGTTCCCCACGGAAAGAG
CATCTAGATTCGAGATAG

Peptide Sequence

PEP ID

XP_016471354.1
PEP Infomation

PREDICTED: AT-rich interactive domain-containing protein 1-like [Nicotiana tabacum]
Sequence

MELELDLREILMKISDEKNKNEGGYANVDLAKSEFDTVKQLCNDIEADDFVFINKHSKKF
DGNISPDLNECILEDVDEKSSVGHDDKCSKFVSGRRSDDCGTDEIRQMNSSVVMEDENNR
KRKRESYTDLLRWVTNVAKDPCDPAIGSLPERSKWKFYGNDVIWKQVLLLRDEMLLRRNA
DTSAQCSIWQIKQKMHPSMYDEDAAAERVRCSQRVLVAKNPLKKALFSASSSSSYPSDED
PIDGPADSSAESEVGLYWKQRRKRIPVGPQFQADIPEWRQEKCESDSKWLRTQIWPLDKQ
EKNRMLIERDPIGRGREDICGCQYPGSYECIKFHLAEKRRKVKLELGSAFYRWKFDLMGE
EVALSWTKEEEKKFQDIVKLNPLSTNKSFWNEIFKIFPNKSRESLVSYHFNVFLLRRRGH
QNRTNASIIDSDDDEPEYGPRTNCFGRDSKFSIFCSPRKEHLDSR

Transcript Sequence

Gene sequence data has not been registered.